Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2069837
rs2069837
0.720 GeneticVariation BEFREE Previous work has revealed a genetic association between Takayasu arteritis and a non-coding genetic variant in an enhancer region within <i>IL6</i> (rs2069837 A/G). 31315839

2019

dbSNP: rs2099684
rs2099684
C 0.710 GeneticVariation GWASCAT Genetic determinants and an epistasis of LILRA3 and HLA-B*52 in Takayasu arteritis. 30498034

2018

dbSNP: rs103294
rs103294
T 0.700 GeneticVariation GWASCAT Genetic determinants and an epistasis of LILRA3 and HLA-B*52 in Takayasu arteritis. 30498034

2018

dbSNP: rs117298325
rs117298325
C 0.700 GeneticVariation GWASCAT Genetic determinants and an epistasis of LILRA3 and HLA-B*52 in Takayasu arteritis. 30498034

2018

dbSNP: rs17133698
rs17133698
C 0.700 GeneticVariation GWASCAT Genetic determinants and an epistasis of LILRA3 and HLA-B*52 in Takayasu arteritis. 30498034

2018

dbSNP: rs1713450
rs1713450
C 0.700 GeneticVariation GWASCAT Genetic determinants and an epistasis of LILRA3 and HLA-B*52 in Takayasu arteritis. 30498034

2018

dbSNP: rs2322599
rs2322599
G 0.700 GeneticVariation GWASCAT Genetic determinants and an epistasis of LILRA3 and HLA-B*52 in Takayasu arteritis. 30498034

2018

dbSNP: rs4817988
rs4817988
G 0.700 GeneticVariation GWASCAT Genetic determinants and an epistasis of LILRA3 and HLA-B*52 in Takayasu arteritis. 30498034

2018

dbSNP: rs2476601
rs2476601
0.020 GeneticVariation BEFREE This is the first report documenting an association between PTPN22 R620W and TA. 30470857

2019

dbSNP: rs33996649
rs33996649
0.010 GeneticVariation BEFREE Our data showed that the PTPN22 R620W polymorphism is a risk factor for TA (CC vs. CT: OR 4.3, p = 0.002, and C vs. T: OR 4.1, p = 0.003); however, the PTPN22 R263Q and - 1123G/C polymorphisms are not associated with this AD. 30470857

2019

dbSNP: rs665268
rs665268
MLX
0.020 GeneticVariation BEFREE MLX-Q139R mutation plays a crucial role in the pathogenesis of TAK through promoting inflammasome formation. 30354298

2018

dbSNP: rs1205
rs1205
CRP
0.010 GeneticVariation BEFREE T allele of rs1205 in CRP gene was less frequent in TA. 29024426

2018

dbSNP: rs6871626
rs6871626
0.050 GeneticVariation BEFREE A previous study revealed the association between susceptibility to Takayasu arteritis (TAK) and a single nucleotide polymorphism (SNP) rs6871626 located in IL12B, which encodes interleukin (IL)-12p40, a common component of IL-12p70 and IL-23. 28874185

2017

dbSNP: rs6871626
rs6871626
0.050 GeneticVariation BEFREE IL12B rs6871626 did not show an association with IBD-TA compared with that with TA without IBD. 28449344

2017

dbSNP: rs1800795
rs1800795
0.010 GeneticVariation BEFREE GG genotypes of rs1800795 in IL-6 was also associated with occurrence of tuberculosis in our patients with TA. 28438554

2018

dbSNP: rs763780
rs763780
0.010 GeneticVariation BEFREE G allele of rs763780 in IL-17F gene was protectively associated against susceptibility to TA. 28438554

2018

dbSNP: rs1264457
rs1264457
0.010 GeneticVariation BEFREE sHLA-E level is useful as a biomarker of disease activity and course in TA patients. rs1264457 polymorphism is neither associated with susceptibility nor did it influence sHLA-E levels in TA. 28425192

2018

dbSNP: rs12524487
rs12524487
0.720 GeneticVariation BEFREE Our findings indicated that rs12524487 in HLA-B/MICA was a genetic risk factor for TA in a Chinese Han population and rs9366782 in this region was associated with ischemic brain disease in TA but not TA susceptibility. 28261975

2018

dbSNP: rs114202986
rs114202986
0.010 GeneticVariation BEFREE However, rs3763288 and rs114202986 in MICA were negatively related to TA either as a whole or in any clinical features. 28261975

2018

dbSNP: rs3763288
rs3763288
0.010 GeneticVariation BEFREE However, rs3763288 and rs114202986 in MICA were negatively related to TA either as a whole or in any clinical features. 28261975

2018

dbSNP: rs9366782
rs9366782
0.010 GeneticVariation BEFREE Our findings indicated that rs12524487 in HLA-B/MICA was a genetic risk factor for TA in a Chinese Han population and rs9366782 in this region was associated with ischemic brain disease in TA but not TA susceptibility. 28261975

2018

dbSNP: rs6871626
rs6871626
0.050 GeneticVariation BEFREE We demonstrated a allele association between the four SNPs of IL12B and TA (rs6871626: OR 1.52, 95% CI 1.26-1.83; rs4921492: OR 1.46, 95% CI 1.21-1.75; rs60689680: OR 1.41, 95% CI 1.17-1.69; rs4921493: OR 1.45, 95% CI 1.21-1.75, all P <sub>c</sub>  < 10<sup>- 3</sup> ). 28160070

2017

dbSNP: rs4921492
rs4921492
0.010 GeneticVariation BEFREE We demonstrated a allele association between the four SNPs of IL12B and TA (rs6871626: OR 1.52, 95% CI 1.26-1.83; rs4921492: OR 1.46, 95% CI 1.21-1.75; rs60689680: OR 1.41, 95% CI 1.17-1.69; rs4921493: OR 1.45, 95% CI 1.21-1.75, all P <sub>c</sub>  < 10<sup>- 3</sup> ). 28160070

2017

dbSNP: rs4921493
rs4921493
0.010 GeneticVariation BEFREE We demonstrated a allele association between the four SNPs of IL12B and TA (rs6871626: OR 1.52, 95% CI 1.26-1.83; rs4921492: OR 1.46, 95% CI 1.21-1.75; rs60689680: OR 1.41, 95% CI 1.17-1.69; rs4921493: OR 1.45, 95% CI 1.21-1.75, all P <sub>c</sub>  < 10<sup>- 3</sup> ). 28160070

2017

dbSNP: rs60689680
rs60689680
0.010 GeneticVariation BEFREE We demonstrated a allele association between the four SNPs of IL12B and TA (rs6871626: OR 1.52, 95% CI 1.26-1.83; rs4921492: OR 1.46, 95% CI 1.21-1.75; rs60689680: OR 1.41, 95% CI 1.17-1.69; rs4921493: OR 1.45, 95% CI 1.21-1.75, all P <sub>c</sub>  < 10<sup>- 3</sup> ). 28160070

2017